So were you planning to render 1: a moving cloudscape (i.e. an animated atmosphere), outputting an image sequence, and then 2: a *static* terrain, outputting a *single* image, then composite them together? If so, and your animation truly has little or no effect no the terrain, then yeah you'd save render time if you did what Matt suggests (otherwise it will actually render *more* sky, if you just turned off terrain). However, if you need to render sequences of both terrain and atmosphere, then you save no time rendering them separately (probably the opposite). I would guess the latter is not what you want to do, but it is what I had first understood was your intention...
- Oshyan